VARNA: Visualization Applet for RNA secondary structure

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• VARNA: Visualization Applet for RNA secondary structure

  VARNA is Java lightweight Applet dedicated to drawing the secondary structure of RNA. It is also a Swing component that can be very easily included in an existing Java code working with R...

• VARNA: Visualization Applet for RNA secondary structure

  VARNA: Interactive drawing and editing of the RNA secondary structure Kévin Darty, Alain Denise and Yann Ponty Bioinformatics, pp. 1974-1975, Vol. 25,...

• VARNA: Visualization Applet for RNA secondary structure

  Hello RNA world example This first examples illustrates the most basic usage of the Applet, which is to display a structure/sequence, along with a title. Important: You ...

• VARNA: Visualization Applet for RNA secondary structure

  Description Sets the color map palette to be used within a color map drawing. One can either choose a predefined palette of define a custom palette. Predefined palettes are: "red", "blue", "green", "h...

• VARNA: Visualization Applet for RNA secondary structure

  URL example The applet can be configured to fetch the drawn RNA from the internet, by mean of the url parameter. This feature is illustrated in the above example, where four struct...

• VARNA: Visualization Applet for RNA secondary structure

  A - Loop annotations: They are located in the barycenter of a loop, moving along with its bases. As for every other type of annotations, a custom font size can be specified through the color...